Phylogenetic Software

Below is a list of links to various freeware for molecular analyses and phylogenetic inference:

 

MEGA - Molecular Evolutionary Genetics Analysis (Windows only)

PHYLIP - PHYLogeny Inference Package (Windows, Mac, Linux)

eBiotools (numerous molecular tools in one package; Mac OS X only)

MrBayes (Bayesian inference of phylogeny; Windows, Mac, Unix)

FastPCR (PCR primer design and DNA and protein tools, including in silico PCR; Windows only)